# filelist

dirname: /usr/src/debug/cook-2.34/cook/expr
filetypes: ffffffffff
filenames:
  catenate.c/catenate.h/constant.c/constant.h/function.c/function.h/list.c/list.h/position.c/position.h


dirname: /usr/src/debug/cook-2.34/cook/builtin
filenames:
  addprefix.c/addprefix.h/addsuffix.c/addsuffix.h/basename.c/basename.h/boolean.c/boolean.h/cando.c/cando.h/collect.c/collect.h/cook.c/cook.h/defined.c/defined.h/dos.c/dos.h/execute.c/execute.h/exists.c/exists.h/expr.c/expr.h/expr_lex.c/expr_lex.h/expr_parse.h/expr_parse.y/expr_parse.yacc.h/filter_out.c/filter_out.h/find_command.c/find_command.h/findstring.c/findstring.h/getenv.c/getenv.h/glob.c/glob.h/home.c/home.h/interi_files.c/interi_files.h/join.c/join.h/match.c/match.h/mtime.c/mtime.h/opsys.c/opsys.h/options.c/options.h/pathname.c/pathname.h/positional.c/positional.h/print.c/print.h/private.c/private.h/read.c/read.h/readlink.c/readlink.h/relati_dirna.c/relati_dirna.h/resolve.c/resolve.h/sort_newest.c/sort_newest.h/split.c/split.h/stringset.c/stringset.h/strip.c/strip.h/stripdot.c/stripdot.h/strlen.c/strlen.h/subst.c/subst.h/substr.c/substr.h/suffix.c/suffix.h/text.c/text.h/thread-id.c/thread-id.h/unsplit.c/unsplit.h/uptodate.c/uptodate.h/word.c/word.h/wordlist.c/wordlist.h/write.c/write.h

filetypes:
  fffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff


dirname: /usr/src/debug/cook-2.34/cook
filetypes: ffdffffffffffdffdffffffdfffffdffdfffffdffffdffffdfffffdffffdffffff
filenames:
  archive.c/archive.h/builtin/builtin.c/builtin.h/cascade.c/cascade.h/cook.c/cook.h/desist.c/desist.h/dir_part.c/dir_part.h/expr/expr.c/expr.h/fingerprint/fingerprint.c/fingerprint.h/flag.c/flag.h/function.c/function.h/graph/graph.c/graph.h/hashline.h/hashline.y/hashline.yacc.h/id/id.c/id.h/lex/lex.c/lex.h/listing.c/listing.h/main.c/match/match.c/match.h/meter.c/meter.h/opcode/opcode.c/opcode.h/option.c/option.h/os/os.c/os_interface.h/parse.h/parse.y/parse.yacc.h/recipe/recipe.c/recipe.h/stat.cache.c/stat.cache.h/stmt/stmt.c/stmt.h/strip_dot.c/strip_dot.h/tempfilename.c/tempfilename.h


dirname: /usr/src/debug/cook-2.34/cook/os
filetypes: fffffffff
filenames:
  below_dir.c/below_dir.h/dirnam_relat.c/pathname.c/rel_if_poss.c/rel_if_poss.h/symlink.c/wait.c/wait.h


dirname: /usr/src/debug/cook-2.34/cook/opcode
filetypes: fffffffffffffffffffffffffffffffffffffffffffffffffffffff
filenames:
  assign.c/assign.h/assign_appen.c/assign_appen.h/assign_local.c/assign_local.h/cascade.c/cascade.h/catenate.c/catenate.h/command.c/command.h/context.c/context.h/fail.c/fail.h/function.c/function.h/gosub.c/gosub.h/goto.c/goto.h/jmpf.c/jmpf.h/jmpt.c/label.c/label.h/list.c/list.h/postlude.c/postlude.h/prelude.c/prelude.h/private.c/private.h/push.c/push.h/recipe.c/recipe.h/set.c/set.h/setenv.c/setenv.h/setenv_appen.c/setenv_appen.h/status.c/status.h/string.c/string.h/thread-id.c/thread-id.h/touch.c/touch.h/unsetenv.c/unsetenv.h


dirname: /usr/src/debug/cook-2.34/cook/fingerprint
filetypes: ffffffffffffffffffff
filenames:
  calc_string.c/calculate.c/filename.c/filename.h/find.c/find.h/gram.h/gram.y/gram.yacc.h/ingredients.c/lex.c/lex.h/record.c/record.h/subdir.c/subdir.h/sync.c/sync.h/value.c/value.h


dirname: /usr/src/debug/cook-2.34/cook/graph
filetypes: ffffffffffffffffffffffffff
filenames:
  build.c/build.h/check.c/edge_type.c/edge_type.h/file.c/file.h/file_list.c/file_list.h/file_pair.c/file_pair.h/leaf.c/leaf.h/pairs.c/recipe.c/recipe.h/recipe_list.c/recipe_list.h/run.c/script.c/stats.c/stats.h/walk.c/walk.h/web.c/web.h


dirname: /usr/src/debug/cook-2.34/common/sub
filetypes: ffffffffffffffffffff
filenames:
  basename.c/date.c/dirname.c/downcase.c/errno.c/expr.c/expr_gram.h/expr_gram.y/expr_gram.yacc.h/expr_lex.c/expr_lex.h/ident.c/left.c/length.c/plural.c/private.h/progname.c/right.c/upcase.c/zero_pad.c


dirname: /usr/src/debug/cook-2.34/c_incl
filetypes: fffffffffffffffffffff
filenames:
  cache.c/cache.h/flatten.c/flatten.h/lang.c/lang.h/lang_c.c/lang_c.h/lang_m4.c/lang_m4.h/lang_optimis.c/lang_optimis.h/lang_roff.c/lang_roff.h/main.c/os.c/os_interface.h/sniff.c/sniff.h/stripdot.c/stripdot.h


dirname: /usr/src/debug/cook-2.34/cook/stmt
filetypes: fffffffffffffffffffffffffffffff
filenames:
  append.c/append.h/assign.c/assign.h/command.c/command.h/compound.c/compound.h/fail.c/fail.h/gosub.c/gosub.h/if.c/if.h/list.c/list.h/loop.c/loop.h/loopvar.c/loopvar.h/nop.c/nop.h/recipe.c/recipe.h/return.c/return.h/set.c/set.h/touch.c/unsetenv.c/unsetenv.h


dirname: /usr/src/debug/cook-2.34/make2cook/stmt
filetypes: fffffffffffffffffffffff
filenames:
  assign.c/assign.h/blank.c/blank.h/command.c/command.h/comment.c/comment.h/compound.c/compound.h/define.c/export.c/export.h/if.c/if.h/include.c/include.h/rule.c/rule.h/unexport.c/unexport.h/vpath.c/vpath.h


dirname: /usr/lib/debug/usr/bin
filetypes: ffffffffff
filenames:
  c_incl.debug/cook.debug/cook_bom.debug/cookfp.debug/cooktime.debug/file_check.debug/find_libs.debug/fstrcmp.debug/make2cook.debug/roffpp.debug


dirname: /usr/src/debug/cook-2.34/common/fp
filetypes: ffffffffffffff
filenames:
  cksum.c/cksum.h/combined.c/combined.h/crc32.c/crc32.h/ident.c/ident.h/len.c/len.h/md5.c/md5.h/snefru.c/snefru.h


dirname: /usr/src/debug/cook-2.34/make2cook
filetypes: ffffffffffdffffff
filenames:
  blob.c/blob.h/emit.c/emit.h/gram.h/gram.y/gram.yacc.h/lex.c/lex.h/main.c/stmt/stmt.c/stmt.h/vargram.y/vargram.yacc.h/variable.c/variable.h


dirname: /usr/src/debug/cook-2.34/cook/id
filetypes: ffffffffffff
filenames:
  builtin.c/builtin.h/function.c/function.h/global.c/global.h/nothing.c/nothing.h/private.c/private.h/variable.c/variable.h


dirname: /usr/src/debug/cook-2.34/common
filetypes: dffffffdffffffdffffffffffdffffffffffffffffffffffdffffffdffffffffffffffff
filenames:
  ac/arglex.c/arglex.h/env.c/env.h/error.c/error.h/error_intl/error_intl.c/error_intl.h/exeext.c/exeext.h/fflush_slow.c/fflush_slow.h/fp/fp.c/fp.h/fstrcmp.c/fstrcmp.h/gmatch.c/gmatch.h/help.c/help.h/home_directo.c/home_directo.h/input/input.c/input.h/itab.c/itab.h/language.c/language.h/libdir.c/libdir.h/mem.c/mem.h/mprintf.c/mprintf.h/os_path_cat.c/os_path_cat.h/page.c/page.h/progname.c/progname.h/quit.c/quit.h/star.c/star.h/str/str.c/str.h/str_list.c/str_list.h/stracc.c/stracc.h/sub/sub.c/sub.h/symtab.c/symtab.h/ts.c/ts.h/verbose.c/verbose.h/version-stmp.c/version-stmp.h/version.c/version.h/wstr.c/wstr.h/wstr_list.c/wstr_list.h


dirname: /usr/src/debug/cook-2.34/cook/match
filetypes: fffffffffffff
filenames:
  cook.c/cook.h/new.c/new_by_recip.c/new_by_recip.h/private.c/private.h/regex.c/regex.h/stack.c/stack.h/wl.c/wl.h


dirname: /usr/src/debug/cook-2.34/common/input
filetypes: fffffffffffff
filenames:
  crlf.c/crlf.h/file.c/file.h/file_text.c/file_text.h/null.c/null.h/private.c/private.h/pushba_trans.c/stdin.c/stdin.h


dirname: /usr/src/debug/coolkey-1.1.0/src/libckyapplet
filetypes: ffffffffff
filenames:
  cky_applet.c/cky_applet.h/cky_base.c/cky_base.h/cky_card.c/cky_card.h/cky_factory.c/cky_factory.h/dynlink.h/dynlink_unix.c


dirname: /usr/src/debug/coolkey-1.1.0/src/coolkey
filetypes: fffffffffffffffff
filenames:
  PKCS11Exception.cpp/PKCS11Exception.h/coolkey.cpp/locking.cpp/locking.h/log.cpp/log.h/machdep.cpp/machdep.h/object.cpp/object.h/params.h/pkcs11.h/pkcs11f.h/pkcs11t.h/slot.cpp/slot.h


dirname: /usr/lib/debug/usr/lib
filetypes: ffffd
filenames:
  libckyapplet.so.1.0.0.debug/libckyapplet.so.1.debug/libckyapplet.so.debug/libcoolkeypk11.so.debug/pkcs11


dirname: /usr/src/debug/coot-0.8.8/geometry
filetypes: ffffffffffffffffffffffffffffff
filenames:
  available-comp-id.cc/chem_mods.cc/chem_mods.hh/cif-parse.cc/compare-dictionaries.cc/dict-mismatches.hh/dict-utils.cc/dict-utils.hh/dreiding.cc/energy-lib.cc/energy-lib.hh/hb-types.hh/lbg-graph.cc/lbg-graph.hh/main-chain.cc/main-chain.hh/make-shelx-restraints.cc/match-results.hh/mol-utils-2.cc/mol-utils-2.hh/protein-donor-acceptors.cc/protein-donor-acceptors.hh/protein-geometry-mmdb.cc/protein-geometry.cc/protein-geometry.hh/read-sbase.cc/residue-and-atom-specs.cc/residue-and-atom-specs.hh/srs-interface.cc/srs-interface.hh


dirname: /usr/src/debug/coot-0.8.8/lidia-core
filetypes: fffffffffffffffffffff
filenames:
  bond-record-container-t.cc/bond-record-container-t.hh/bond-table-record-t.cc/bond-table-record-t.hh/chemical-feature-clusters.cc/chemical-feature-clusters.hh/cod-atom-type-t.cc/cod-atom-type-t.hh/cod-atom-types.cc/cod-atom-types.hh/lbg-molfile.cc/lbg-molfile.hh/lbg-shared.cc/lbg-shared.hh/lig-build.cc/lig-build.hh/neighbour-sorter.hh/primes.hh/rdkit-interface.cc/rdkit-interface.hh/third-neighbour-info-t.hh


dirname: /usr/src/debug/coot-0.8.8/surface
filetypes: ffffffffffffffffffffffffffffffffffffffffffffffff
filenames:
  CXXAlloc.h/CXXBall.cpp/CXXBall.h/CXXChargeTable.cpp/CXXChargeTable.h/CXXCircle.cpp/CXXCircle.h/CXXCircleNode.cpp/CXXCircleNode.h/CXXCoord.cpp/CXXCoord.h/CXXCreator.cpp/CXXCreator.h/CXXException.cpp/CXXException.h/CXXFFTSolventMap.cpp/CXXFFTSolventMap.h/CXXFortranFile.cpp/CXXFortranFile.h/CXXNewHood.cpp/CXXNewHood.h/CXXQADSurface.cpp/CXXQADSurface.h/CXXQADSurfaceStaticData.cpp/CXXSpace.cpp/CXXSpace.h/CXXSphereElement.cpp/CXXSphereElement.h/CXXSphereFlatTriangle.h/CXXSphereNode.cpp/CXXSphereNode.h/CXXSphereTriangle.cpp/CXXSphereTriangle.h/CXXSphereTriangleEdge.cpp/CXXSphereTriangleEdge.h/CXXSurface.cpp/CXXSurface.h/CXXSurfaceVertex.cpp/CXXSurfaceVertex.h/CXXTorusElement.cpp/CXXTorusElement.h/CXXTorusNode.cpp/CXXTorusNode.h/CXXTriangle.cpp/CXXTriangle.h/CXXUtils.cpp/CXXUtils.h/TokenIterator.h


dirname: /usr/src/debug/coot-0.8.8/density-contour
filetypes: ffffff
filenames:
  CIsoSurface.cpp/CIsoSurface.h/Vectors.cpp/Vectors.h/density-contour-triangles.cc/density-contour-triangles.hh


dirname: /usr/src/debug/coot-0.8.8/analysis
filetypes: fffffffffff
filenames:
  bfactan.cc/bfkurt.cc/bfkurt.hh/cablam.cc/cablam.hh/kolmogorov.cc/kolmogorov.hh/mogul-interface.hh/mogul.cc/stats.cc/stats.hh


dirname: /usr/lib/debug/.build-id/9f
filetypes: ffff
filenames:
  36e550e38db1a570e2bd43d9a7c140c84ab835/36e550e38db1a570e2bd43d9a7c140c84ab835.debug/5d1ac37f534e34ca79e548e13c8f7a76f9630b/5d1ac37f534e34ca79e548e13c8f7a76f9630b.debug


dirname: /usr/src/debug/coot-0.8.8/coot-utils
filetypes: fffffffffffffffffffffffffffffffffffffffffffffffffff
filenames:
  atom-overlaps.cc/atom-overlaps.hh/bonded-pairs.cc/bonded-pairs.hh/coot-coord-extras.cc/coot-coord-extras.hh/coot-coord-lsq.cc/coot-coord-utils-glyco.cc/coot-coord-utils-nucleotides.cc/coot-coord-utils.cc/coot-coord-utils.hh/coot-density-stats.hh/coot-fffear.cc/coot-h-bonds.cc/coot-h-bonds.hh/coot-hole.hh/coot-least-squares.cc/coot-least-squares.hh/coot-map-heavy.cc/coot-map-heavy.hh/coot-map-utils.cc/coot-map-utils.hh/coot-rama.cc/coot-rama.hh/coot-shelx-ins.cc/coot-shelx.hh/coot-tree-extras.cc/coot-trim.hh/elastic.cc/elastic.hh/emma.hh/glyco-torsions.cc/glyco-torsions.hh/helix-analysis.cc/helix-analysis.hh/hole.cc/lsq-improve.cc/lsq-improve.hh/maps-spherical.cc/peak-search-from-list.cc/peak-search.cc/peak-search.hh/read-sm-cif.cc/read-sm-cif.hh/reduce.cc/reduce.hh/tree.hh/trim.cc/water-coordination.cc/xmap-stats.cc/xmap-stats.hh


dirname: /usr/lib/debug/usr/lib
filetypes: fffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffd
filenames:
  libccp4mg-utils.so.0.0.0.debug/libccp4mg-utils.so.0.debug/libccp4mg-utils.so.debug/libcoot-AngleInfo.so.0.0.0.debug/libcoot-AngleInfo.so.0.debug/libcoot-AngleInfo.so.debug/libcoot-analysis.so.0.0.0.debug/libcoot-analysis.so.0.debug/libcoot-analysis.so.debug/libcoot-cabuild.so.0.0.0.debug/libcoot-cabuild.so.0.debug/libcoot-cabuild.so.debug/libcoot-compat.so.0.0.0.debug/libcoot-compat.so.0.debug/libcoot-compat.so.debug/libcoot-coord-extras.so.0.0.0.debug/libcoot-coord-extras.so.0.debug/libcoot-coord-extras.so.debug/libcoot-coord-utils.so.0.0.0.debug/libcoot-coord-utils.so.0.debug/libcoot-coord-utils.so.debug/libcoot-coords.so.0.0.0.debug/libcoot-coords.so.0.debug/libcoot-coords.so.debug/libcoot-db-main.so.0.0.0.debug/libcoot-db-main.so.0.debug/libcoot-db-main.so.debug/libcoot-electrostatics.so.0.0.0.debug/libcoot-electrostatics.so.0.debug/libcoot-electrostatics.so.debug/libcoot-geometry.so.0.0.0.debug/libcoot-geometry.so.0.debug/libcoot-geometry.so.debug/libcoot-goograph.so.0.0.0.debug/libcoot-goograph.so.0.debug/libcoot-goograph.so.debug/libcoot-gtkgraph.so.0.0.0.debug/libcoot-gtkgraph.so.0.debug/libcoot-gtkgraph.so.debug/libcoot-high-res.so.0.0.0.debug/libcoot-high-res.so.0.debug/libcoot-high-res.so.debug/libcoot-ideal.so.0.0.0.debug/libcoot-ideal.so.0.debug/libcoot-ideal.so.debug/libcoot-isosurface.so.0.0.0.debug/libcoot-isosurface.so.0.debug/libcoot-isosurface.so.debug/libcoot-lidia-core.so.0.0.0.debug/libcoot-lidia-core.so.0.debug/libcoot-lidia-core.so.debug/libcoot-lidia.so.0.0.0.debug/libcoot-lidia.so.0.debug/libcoot-lidia.so.debug/libcoot-ligand.so.0.0.0.debug/libcoot-ligand.so.0.debug/libcoot-ligand.so.debug/libcoot-map-heavy.so.0.0.0.debug/libcoot-map-heavy.so.0.debug/libcoot-map-heavy.so.debug/libcoot-map-utils.so.0.0.0.debug/libcoot-map-utils.so.0.debug/libcoot-map-utils.so.debug/libcoot-mini-mol.so.0.0.0.debug/libcoot-mini-mol.so.0.debug/libcoot-mini-mol.so.debug/libcoot-protein-db.so.0.0.0.debug/libcoot-protein-db.so.0.debug/libcoot-protein-db.so.debug/libcoot-shelx.so.0.0.0.debug/libcoot-shelx.so.0.debug/libcoot-shelx.so.debug/libcoot-skeleton.so.0.0.0.debug/libcoot-skeleton.so.0.debug/libcoot-skeleton.so.debug/libcoot-surface.so.0.0.0.debug/libcoot-surface.so.0.debug/libcoot-surface.so.debug/libcoot-tw.so.0.0.0.debug/libcoot-tw.so.0.debug/libcoot-tw.so.debug/libcoot-utils.so.0.0.0.debug/libcoot-utils.so.0.debug/libcoot-utils.so.debug/libcoot_py_restraints.so.0.0.0.debug/libcoot_py_restraints.so.0.debug/libcoot_py_restraints.so.debug/libcootaneer.so.0.0.0.debug/libcootaneer.so.0.debug/libcootaneer.so.debug/libcootilus.so.0.0.0.debug/libcootilus.so.0.debug/libcootilus.so.debug/python2.7


dirname: /usr/src/debug/coot-0.8.8/ideal
filetypes: fffffffffffffffffffffffffff
filenames:
  chirals.cc/coot-compare-residues.cc/distortion.cc/extra-restraints-kk.cc/extra-restraints.cc/extra-restraints.hh/flanking.cc/gradients.cc/link-restraints.cc/lograma.cpp/lograma.h/mini-rsr.cc/model-bond-deltas.cc/model-bond-deltas.hh/mods.cc/parallel-planes.cc/parallel-planes.hh/pepflip.cc/pepflip.hh/regularize-minimol.cc/regularize-minimol.hh/simple-restraint-kk.cc/simple-restraint.cc/simple-restraint.hh/torsion-bonds.cc/torsion-bonds.hh/trans-peptide.cc


dirname: /usr/src/debug/coot-0.8.8
filetypes: dddddddddddddddddddddddddddd
filenames:
  analysis/angles/build/ccp4mg-utils/compat/coords/coot-surface/coot-utils/cootaneer/cootilus/db-main/density-contour/geometry/goograph/high-res/ideal/lbg/libgtkgraph/lidia-core/ligand/mini-mol/protein_db/pyrogen/skeleton/src/surface/tw/utils


dirname: /usr/src/debug/coot-0.8.8/ccp4mg-utils
filetypes: ffffffffffff
filenames:
  cartesian.cc/cartesian.h/geomutil.cc/geomutil.h/matrix.cc/matrix.h/mgtree.cc/mgtree.h/ppmutil.cc/ppmutil.h/quat.cc/quat.h


dirname: /usr/src/debug/coot-0.8.8/angles
filetypes: fffff
filenames:
  AngleInfo-angle-torsions-autogen.cc/AngleInfo-theta_2-autogen.cc/AngleInfo.cc/AngleInfo.h/wrapped-ncube.h


dirname: /usr/lib/debug/.build-id
filetypes: ddddddddddddddddddddddddddddddddddddddddd
filenames:
  00/02/05/0b/0d/11/18/1c/1f/25/27/2d/30/3d/47/52/54/5c/69/6c/6d/6e/71/73/89/9f/a5/aa/b6/b7/c2/c9/ce/d5/db/de/e3/e8/ed/f9/ff


dirname: /usr/src/debug/coot-0.8.8/ligand
filetypes: fffffffffffffffffffffffffffffffffffffffffffff
filenames:
  backrub-rotamer.cc/backrub-rotamer.hh/base-pairing.cc/base-pairing.hh/chi-angles-autogen.cc/chi-angles.cc/chi-angles.hh/dipole.cc/dipole.hh/dunbrack.cc/dunbrack.hh/fast-ss-search.cc/fast-ss-search.hh/find-ligand.cc/find-waters.cc/helix-placement.cc/helix-placement.hh/ideal-rna.cc/ideal-rna.hh/ligand-extras.cc/ligand.cc/ligand.hh/monomer-utils.cc/monomer-utils.hh/multi-peptide.cc/multi-peptide.hh/primitive-chi-angles.cc/primitive-chi-angles.hh/residue_by_phi_psi.cc/residue_by_phi_psi.hh/richardson-rotamer.cc/richardson-rotamer.hh/richardson-rotamers.cc/rigid-body.cc/rigid-body.hh/rotamer-tables.cc/rotamer.cc/rotamer.hh/torsion-general.cc/torsion-general.hh/trace-2.cc/trace.cc/trace.hh/wiggly-ligand.cc/wligand.hh


dirname: /usr/lib/debug/.build-id/f9
filetypes: ffff
filenames:
  3fe0b06c74ed05d9859a821eee5d2124bdd5b3/3fe0b06c74ed05d9859a821eee5d2124bdd5b3.debug/760b577a61c3e1d893fa7de3a603aa0ce46d0c/760b577a61c3e1d893fa7de3a603aa0ce46d0c.debug


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dirname: /usr/src/debug/crawl-0.20.1/crawl-ref/crawl-tiles
filenames:
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dirname: /usr/src/debug/cube-4.3.5/src/GUI-qt/plugins/AdvancedColorMaps
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dirname: /usr/src/debug/cube-4.3.5/src/GUI-qt/plugins/SourceCodeEditor
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dirname: /usr/src/debug/cube-4.3.5/src/cube/include/service
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dirname: /usr/src/debug/cube-4.3.5/src/cube/include/syntax/cubepl/evaluators/unary/functions/single_argument
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dirname: /usr/src/debug/cube-4.3.5/src/cube/include/dimensions/metric/value
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dirname: /usr/src/debug/cube-4.3.5/src/tools/tools/0031.ReMap2
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