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ModificationsDB Member List

This is the complete list of members for ModificationsDB, including all inherited members.

findModificationIndex(const String &mod_name) const ModificationsDB
getAllSearchModifications(std::vector< String > &modifications)ModificationsDB
getInstance()ModificationsDBinlinestatic
getModification(Size index) const ModificationsDB
getModification(const String &residue_name, const String &mod_name, ResidueModification::Term_Specificity term_spec) const ModificationsDB
getModification(const String &modification) const ModificationsDB
getModificationsByDiffMonoMass(std::vector< String > &mods, DoubleReal mass, DoubleReal error=0.0)ModificationsDB
getModificationsByDiffMonoMass(std::vector< String > &mods, const String &residue, DoubleReal mass, DoubleReal error=0.0)ModificationsDB
getNumberOfModifications() const ModificationsDB
getTerminalModification(const String &name, ResidueModification::Term_Specificity term_spec) const ModificationsDB
getTerminalModificationsByDiffMonoMass(std::vector< String > &mods, DoubleReal mass, DoubleReal error, ResidueModification::Term_Specificity term_spec)ModificationsDB
modification_names_ModificationsDBprotected
ModificationsDB()ModificationsDBprivate
ModificationsDB(const ModificationsDB &residue_db)ModificationsDBprivate
mods_ModificationsDBprotected
operator=(const ModificationsDB &aa)ModificationsDBprivate
readFromOBOFile(const String &filename)ModificationsDB
readFromUnimodXMLFile(const String &filename)ModificationsDB
searchModifications(std::set< const ResidueModification * > &mods, const String &orgin, const String &mod_name, ResidueModification::Term_Specificity term_spec) const ModificationsDB
searchModifications(std::set< const ResidueModification * > &mods, const String &mod_name, ResidueModification::Term_Specificity term_spec) const ModificationsDB
searchTerminalModifications(std::set< const ResidueModification * > &mods, const String &name, ResidueModification::Term_Specificity term_spec) const ModificationsDB
~ModificationsDB()ModificationsDBprivatevirtual

OpenMS / TOPP release 1.11.1 Documentation generated on Thu Nov 14 2013 11:19:27 using doxygen 1.8.5