This is the complete list of members for FeatureFindingMetabo, including all inherited members.
begin_ | ProgressLogger | mutableprotected |
charge_lower_bound_ | FeatureFindingMetabo | private |
charge_upper_bound_ | FeatureFindingMetabo | private |
check_defaults_ | DefaultParamHandler | protected |
chrom_fwhm_ | FeatureFindingMetabo | private |
CMD enum value | ProgressLogger | |
computeAveragineSimScore_(const std::vector< DoubleReal > &, const DoubleReal &) | FeatureFindingMetabo | private |
computeCosineSim_(const std::vector< DoubleReal > &, const std::vector< DoubleReal > &) | FeatureFindingMetabo | private |
computeOLSCoeff_(const std::vector< DoubleReal > &, const std::vector< DoubleReal > &) | FeatureFindingMetabo | private |
DefaultParamHandler(const String &name) | DefaultParamHandler | |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
defaults_ | DefaultParamHandler | protected |
defaultsToParam_() | DefaultParamHandler | protected |
disable_isotope_filtering_ | FeatureFindingMetabo | private |
dlg_ | ProgressLogger | mutableprotected |
end_ | ProgressLogger | mutableprotected |
endProgress() const | ProgressLogger | |
error_name_ | DefaultParamHandler | protected |
FeatureFindingMetabo() | FeatureFindingMetabo | |
findLocalFeatures_(std::vector< MassTrace * > &, std::vector< FeatureHypothesis > &) | FeatureFindingMetabo | private |
getDefaults() const | DefaultParamHandler | |
getLogType() const | ProgressLogger | |
getName() const | DefaultParamHandler | |
getParameters() const | DefaultParamHandler | |
getSubsections() const | DefaultParamHandler | |
GUI enum value | ProgressLogger | |
isLegalIsotopePattern2_(FeatureHypothesis &) | FeatureFindingMetabo | private |
isLegalIsotopePattern_(FeatureHypothesis &) | FeatureFindingMetabo | private |
isotope_filt_svm_ | FeatureFindingMetabo | private |
isotope_model_ | FeatureFindingMetabo | private |
last_invoke_ | ProgressLogger | mutableprotected |
loadIsotopeModel_(const String &) | FeatureFindingMetabo | private |
local_mz_range_ | FeatureFindingMetabo | private |
local_rt_range_ | FeatureFindingMetabo | private |
LogType enum name | ProgressLogger | |
metabo_iso_noisemodel_ | FeatureFindingMetabo | private |
NONE enum value | ProgressLogger | |
operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
param_ | DefaultParamHandler | protected |
ProgressLogger() | ProgressLogger | |
recursion_depth_ | ProgressLogger | protectedstatic |
report_summed_ints_ | FeatureFindingMetabo | private |
run(std::vector< MassTrace > &, FeatureMap<> &) | FeatureFindingMetabo | |
scoreMZ2_(const MassTrace &, const MassTrace &, Size, Size) | FeatureFindingMetabo | private |
scoreMZ_(const MassTrace &, const MassTrace &, Size, Size) | FeatureFindingMetabo | private |
scoreRT_(const MassTrace &, const MassTrace &) | FeatureFindingMetabo | private |
setLogType(LogType type) const | ProgressLogger | |
setName(const String &name) | DefaultParamHandler | |
setParameters(const Param ¶m) | DefaultParamHandler | |
setProgress(SignedSize value) const | ProgressLogger | |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger | |
stop_watch_ | ProgressLogger | mutableprotected |
subsections_ | DefaultParamHandler | protected |
svm_feat_centers_ | FeatureFindingMetabo | private |
svm_feat_scales_ | FeatureFindingMetabo | private |
total_intensity_ | FeatureFindingMetabo | private |
type_ | ProgressLogger | mutableprotected |
updateMembers_() | FeatureFindingMetabo | protectedvirtual |
use_smoothed_intensities_ | FeatureFindingMetabo | private |
value_ | ProgressLogger | mutableprotected |
warn_empty_defaults_ | DefaultParamHandler | protected |
~DefaultParamHandler() | DefaultParamHandler | virtual |
~FeatureFindingMetabo() | FeatureFindingMetabo | virtual |
~ProgressLogger() | ProgressLogger | |