This is the complete list of members for IonizationSimulation, including all inherited members.
basic_residues_ | IonizationSimulation | private |
begin_ | ProgressLogger | mutableprotected |
check_defaults_ | DefaultParamHandler | protected |
CMD enum value | ProgressLogger | |
countIonizedResidues_(const AASequence &) const | IonizationSimulation | private |
DefaultParamHandler(const String &name) | DefaultParamHandler | |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
defaults_ | DefaultParamHandler | protected |
defaultsToParam_() | DefaultParamHandler | protected |
dlg_ | ProgressLogger | mutableprotected |
end_ | ProgressLogger | mutableprotected |
endProgress() const | ProgressLogger | |
error_name_ | DefaultParamHandler | protected |
ESI enum value | IonizationSimulation | |
esi_adducts_ | IonizationSimulation | private |
esi_impurity_probabilities_ | IonizationSimulation | private |
esi_probability_ | IonizationSimulation | private |
getDefaults() const | DefaultParamHandler | |
getLogType() const | ProgressLogger | |
getName() const | DefaultParamHandler | |
getParameters() const | DefaultParamHandler | |
getSubsections() const | DefaultParamHandler | |
GUI enum value | ProgressLogger | |
ionization_type_ | IonizationSimulation | private |
IonizationSimulation(const SimRandomNumberGenerator &) | IonizationSimulation | |
IonizationSimulation(const IonizationSimulation &source) | IonizationSimulation | |
IonizationSimulation() | IonizationSimulation | private |
IonizationType enum name | IonizationSimulation | |
ionize(FeatureMapSim &features, ConsensusMap &charge_consensus, MSSimExperiment &experiment) | IonizationSimulation | |
ionizeEsi_(FeatureMapSim &, ConsensusMap &charge_consensus) | IonizationSimulation | private |
ionizeMaldi_(FeatureMapSim &, ConsensusMap &charge_consensus) | IonizationSimulation | private |
isFeatureValid_(const Feature &feature) | IonizationSimulation | inlineprivate |
last_invoke_ | ProgressLogger | mutableprotected |
LogType enum name | ProgressLogger | |
MALDI enum value | IonizationSimulation | |
maldi_probabilities_ | IonizationSimulation | private |
max_adduct_charge_ | IonizationSimulation | private |
maximal_mz_measurement_limit_ | IonizationSimulation | private |
minimal_mz_measurement_limit_ | IonizationSimulation | private |
NONE enum value | ProgressLogger | |
operator=(const IonizationSimulation &source) | IonizationSimulation | |
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
param_ | DefaultParamHandler | protected |
ProgressLogger() | ProgressLogger | |
recursion_depth_ | ProgressLogger | protectedstatic |
rnd_gen_ | IonizationSimulation | protected |
setDefaultParams_() | IonizationSimulation | private |
setFeatureProperties_(Feature &f, const DoubleReal &adduct_mass, const String &adduct_formula, const SimChargeType charge, const SimIntensityType new_intensity, const Size parent_index) | IonizationSimulation | private |
setLogType(LogType type) const | ProgressLogger | |
setName(const String &name) | DefaultParamHandler | |
setParameters(const Param ¶m) | DefaultParamHandler | |
setProgress(SignedSize value) const | ProgressLogger | |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger | |
stop_watch_ | ProgressLogger | mutableprotected |
subsections_ | DefaultParamHandler | protected |
type_ | ProgressLogger | mutableprotected |
updateMembers_() | IonizationSimulation | privatevirtual |
value_ | ProgressLogger | mutableprotected |
warn_empty_defaults_ | DefaultParamHandler | protected |
~DefaultParamHandler() | DefaultParamHandler | virtual |
~IonizationSimulation() | IonizationSimulation | virtual |
~ProgressLogger() | ProgressLogger | |