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RTSimulation Member List

This is the complete list of members for RTSimulation, including all inherited members.

calculateMT_(FeatureMapSim &features, std::vector< DoubleReal > &predicted_retention_times)RTSimulationprivate
check_defaults_DefaultParamHandlerprotected
createExperiment(MSSimExperiment &experiment)RTSimulation
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
egh_tau_location_RTSimulationprivate
egh_tau_scale_RTSimulationprivate
egh_variance_location_RTSimulationprivate
egh_variance_scale_RTSimulationprivate
error_name_DefaultParamHandlerprotected
getChargeContribution_(Map< String, double > &q_cterm, Map< String, double > &q_nterm, Map< String, double > &q_aa_basic, Map< String, double > &q_aa_acidic)RTSimulationprivate
getDefaults() const DefaultParamHandler
getGradientTime() const RTSimulation
getName() const DefaultParamHandler
getParameters() const DefaultParamHandler
getSubsections() const DefaultParamHandler
gradient_max_RTSimulationprivate
gradient_min_RTSimulationprivate
isRTColumnOn() const RTSimulation
noRTColumn_(FeatureMapSim &)RTSimulationprivate
operator=(const RTSimulation &source)RTSimulation
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) const DefaultParamHandlervirtual
param_DefaultParamHandlerprotected
predictContaminantsRT(FeatureMapSim &)RTSimulation
predictRT(FeatureMapSim &features)RTSimulation
rnd_gen_RTSimulationprotected
rt_model_file_RTSimulationprivate
rt_sampling_rate_RTSimulationprivate
RTSimulation(const SimRandomNumberGenerator &random_generator)RTSimulation
RTSimulation(const RTSimulation &source)RTSimulation
RTSimulation()RTSimulationprivate
setDefaultParams_()RTSimulationprivate
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
smoothRTDistortion_(MSSimExperiment &experiment)RTSimulationprivate
subsections_DefaultParamHandlerprotected
total_gradient_time_RTSimulationprivate
updateMembers_()RTSimulationprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
wrapSVM(std::vector< AASequence > &peptide_sequences, std::vector< DoubleReal > &predicted_retention_times)RTSimulation
~DefaultParamHandler()DefaultParamHandlervirtual
~RTSimulation()RTSimulationvirtual

OpenMS / TOPP release 1.11.1 Documentation generated on Thu Nov 14 2013 11:19:33 using doxygen 1.8.5