36 #ifndef OPENMS_ANALYSIS_ID_PROTONDISTRIBUTIONMODEL_H
37 #define OPENMS_ANALYSIS_ID_PROTONDISTRIBUTIONMODEL_H
129 std::vector<DoubleReal> & n_term_intensities, std::vector<DoubleReal> & c_term_intensities, FragmentationType type);
132 void setPeptideProtonDistribution(
const std::vector<DoubleReal> & bb_charge,
const std::vector<DoubleReal> & sc_charge);
153 Residue::ResidueType n_term_type, std::vector<DoubleReal> & n_term_intensities, std::vector<DoubleReal> & c_term_intensities, FragmentationType type);
175 #endif // OPENMS_ANALYSIS_ID_PROTONDISTRIBUTIONMODEL_H
std::vector< DoubleReal > bb_charge_full_
Definition: ProtonDistributionModel.h:164
Definition: Residue.h:374
std::vector< DoubleReal > bb_charge_
Definition: ProtonDistributionModel.h:162
std::vector< DoubleReal > sc_charge_ion_n_term_
Definition: ProtonDistributionModel.h:165
A proton distribution model to calculate the proton distribution over charged peptides.
Definition: ProtonDistributionModel.h:71
Representation of a peptide/protein sequence.
Definition: AASequence.h:84
std::vector< DoubleReal > bb_charge_ion_c_term_
Definition: ProtonDistributionModel.h:168
Definition: ProtonDistributionModel.h:99
FragmentationType
the type of fragmentation
Definition: ProtonDistributionModel.h:96
std::vector< DoubleReal > sc_charge_full_
Definition: ProtonDistributionModel.h:163
DoubleReal E_c_term_
Definition: ProtonDistributionModel.h:170
std::vector< DoubleReal > sc_charge_ion_c_term_
Definition: ProtonDistributionModel.h:167
DoubleReal E_n_term_
Definition: ProtonDistributionModel.h:171
std::vector< DoubleReal > sc_charge_
Definition: ProtonDistributionModel.h:161
DoubleReal E_
Definition: ProtonDistributionModel.h:169
ResidueType
Definition: Residue.h:361
size_t Size
Size type e.g. used as variable which can hold result of size()
Definition: Types.h:144
A base class for all classes handling default parameters.
Definition: DefaultParamHandler.h:90
int Int
Signed integer type.
Definition: Types.h:100
std::vector< DoubleReal > bb_charge_ion_n_term_
Definition: ProtonDistributionModel.h:166