MS2 input file adapter. More...
#include <OpenMS/FORMAT/MS2File.h>
Public Member Functions | |
MS2File () | |
constructor More... | |
virtual | ~MS2File () |
constructor More... | |
template<typename MapType > | |
void | load (const String &filename, MapType &exp) |
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ProgressLogger () | |
Constructor. More... | |
~ProgressLogger () | |
Destructor. More... | |
void | setLogType (LogType type) const |
Sets the progress log that should be used. The default type is NONE! More... | |
LogType | getLogType () const |
Returns the type of progress log being used. More... | |
void | startProgress (SignedSize begin, SignedSize end, const String &label) const |
Initializes the progress display. More... | |
void | setProgress (SignedSize value) const |
Sets the current progress. More... | |
void | endProgress () const |
Ends the progress display. More... | |
Additional Inherited Members | |
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enum | LogType { CMD, GUI, NONE } |
Possible log types. More... | |
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LogType | type_ |
SignedSize | begin_ |
SignedSize | end_ |
SignedSize | value_ |
QProgressDialog * | dlg_ |
StopWatch | stop_watch_ |
time_t | last_invoke_ |
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static int | recursion_depth_ |
MS2 input file adapter.
For the format description take a look at: Rapid Commun Mass Spectrom. 2004;18(18):2162-8.
MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications.
McDonald WH, Tabb DL, Sadygov RG, MacCoss MJ, Venable J, Graumann J, Johnson JR, Cociorva D, Yates JR 3rd.
PMID: 15317041
MS2File | ( | ) |
constructor
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virtual |
constructor
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inline |
References File::exists(), File::readable(), String::simplify(), String::split(), and String::trim().
Referenced by FileHandler::loadExperiment().
OpenMS / TOPP release 1.11.1 | Documentation generated on Thu Nov 14 2013 11:19:31 using doxygen 1.8.5 |