addConvexHull(const FeatureFinderDefs::IndexSet &set, Feature &feature) const | FeaFiModule< PeakType, FeatureType > | inline |
Base typedef | SimpleSeeder< PeakType, FeatureType > | |
ChargedIndexSet typedef | FeatureFinderDefs | |
check_defaults_ | DefaultParamHandler | protected |
CoordinateType typedef | FeaFiModule< PeakType, FeatureType > | |
current_peak_ | SimpleSeeder< PeakType, FeatureType > | protected |
DefaultParamHandler(const String &name) | DefaultParamHandler | |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
defaults_ | DefaultParamHandler | protected |
defaultsToParam_() | DefaultParamHandler | protected |
error_name_ | DefaultParamHandler | protected |
FeaFiModule(const MSExperiment< PeakType > *map, FeatureMap< FeatureType > *features, FeatureFinder *ff) | FeaFiModule< PeakType, FeatureType > | inline |
FeatureMapType typedef | FeaFiModule< PeakType, FeatureType > | |
features_ | FeaFiModule< PeakType, FeatureType > | protected |
ff_ | FeaFiModule< PeakType, FeatureType > | protected |
Flag enum name | FeatureFinderDefs | |
getDefaults() const | DefaultParamHandler | |
getName() const | DefaultParamHandler | |
getNextMz(FeatureFinderDefs::IndexPair &index) const | FeaFiModule< PeakType, FeatureType > | inline |
getNextRt(FeatureFinderDefs::IndexPair &index) | FeaFiModule< PeakType, FeatureType > | inline |
getParameters() const | DefaultParamHandler | |
getPeakIntensity(const FeatureFinderDefs::IndexPair &index) const | FeaFiModule< PeakType, FeatureType > | inline |
getPeakMz(const FeatureFinderDefs::IndexPair &index) const | FeaFiModule< PeakType, FeatureType > | inline |
getPeakRt(const FeatureFinderDefs::IndexPair &index) const | FeaFiModule< PeakType, FeatureType > | inline |
getPrevMz(FeatureFinderDefs::IndexPair &index) const | FeaFiModule< PeakType, FeatureType > | inline |
getPrevRt(FeatureFinderDefs::IndexPair &index) | FeaFiModule< PeakType, FeatureType > | inline |
getSubsections() const | DefaultParamHandler | |
IndexPair typedef | FeatureFinderDefs | |
IndexSet typedef | FeatureFinderDefs | |
indices_ | SimpleSeeder< PeakType, FeatureType > | protected |
initialize_() | SimpleSeeder< PeakType, FeatureType > | inlineprotected |
initialized_ | SimpleSeeder< PeakType, FeatureType > | protected |
IntensityType typedef | FeaFiModule< PeakType, FeatureType > | |
map_ | FeaFiModule< PeakType, FeatureType > | protected |
MapType typedef | SimpleSeeder< PeakType, FeatureType > | |
nextSeed() | SimpleSeeder< PeakType, FeatureType > | inline |
operator=(const SimpleSeeder &) | SimpleSeeder< PeakType, FeatureType > | private |
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
param_ | DefaultParamHandler | protected |
setName(const String &name) | DefaultParamHandler | |
setParameters(const Param ¶m) | DefaultParamHandler | |
SimpleSeeder(const MSExperiment< PeakType > *map, FeatureMap< FeatureType > *features, FeatureFinder *ff) | SimpleSeeder< PeakType, FeatureType > | inline |
SimpleSeeder() | SimpleSeeder< PeakType, FeatureType > | private |
SimpleSeeder(const SimpleSeeder &) | SimpleSeeder< PeakType, FeatureType > | private |
SpectrumType typedef | FeaFiModule< PeakType, FeatureType > | |
subsections_ | DefaultParamHandler | protected |
UNUSED enum value | FeatureFinderDefs | |
updateMembers_() | DefaultParamHandler | protectedvirtual |
USED enum value | FeatureFinderDefs | |
warn_empty_defaults_ | DefaultParamHandler | protected |
~DefaultParamHandler() | DefaultParamHandler | virtual |
~FeaFiModule() | FeaFiModule< PeakType, FeatureType > | inlinevirtual |
~SimpleSeeder() | SimpleSeeder< PeakType, FeatureType > | inlinevirtual |