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PrecursorIonSelectionPreprocessing Member List

This is the complete list of members for PrecursorIonSelectionPreprocessing, including all inherited members.

bin_masses_PrecursorIonSelectionPreprocessingprotected
check_defaults_DefaultParamHandlerprotected
counter_PrecursorIonSelectionPreprocessingprotected
dbPreprocessing(String db_path, bool save=true)PrecursorIonSelectionPreprocessing
dbPreprocessing(String db_path, String rt_model_path, String dt_model_path, bool save=true)PrecursorIonSelectionPreprocessing
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
error_name_DefaultParamHandlerprotected
f_max_PrecursorIonSelectionPreprocessingprotected
filterTaxonomyIdentifier_(FASTAFile::FASTAEntry &entry)PrecursorIonSelectionPreprocessingprotected
fixed_modifications_PrecursorIonSelectionPreprocessingprotected
fixed_mods_PrecursorIonSelectionPreprocessingprotected
getDefaults() const DefaultParamHandler
getFixedModifications()PrecursorIonSelectionPreprocessinginline
getGaussMu()PrecursorIonSelectionPreprocessinginline
getGaussSigma()PrecursorIonSelectionPreprocessinginline
getMasses(String acc) const PrecursorIonSelectionPreprocessing
getName() const DefaultParamHandler
getParameters() const DefaultParamHandler
getProteinPeptideSequenceMap() const PrecursorIonSelectionPreprocessing
getProteinPTMap() const PrecursorIonSelectionPreprocessing
getProteinRTMap() const PrecursorIonSelectionPreprocessing
getProtMasses() const PrecursorIonSelectionPreprocessing
getPT(String prot_id, Size peptide_index)PrecursorIonSelectionPreprocessing
getRT(String prot_id, Size peptide_index)PrecursorIonSelectionPreprocessing
getRTProbability(String prot_id, Size peptide_index, Feature &feature)PrecursorIonSelectionPreprocessing
getRTProbability(DoubleReal pred_rt, Feature &feature)PrecursorIonSelectionPreprocessing
getRTProbability_(DoubleReal min_obs_rt, DoubleReal max_obs_rt, DoubleReal pred_rt)PrecursorIonSelectionPreprocessingprotected
getScanNumber_(DoubleReal rt)PrecursorIonSelectionPreprocessingprotected
getSubsections() const DefaultParamHandler
getWeight(DoubleReal mass)PrecursorIonSelectionPreprocessing
loadPreprocessedDB_(String path)PrecursorIonSelectionPreprocessingprotected
loadPreprocessing()PrecursorIonSelectionPreprocessing
masses_PrecursorIonSelectionPreprocessingprotected
mu_PrecursorIonSelectionPreprocessingprotected
operator=(const PrecursorIonSelectionPreprocessing &source)PrecursorIonSelectionPreprocessing
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) const DefaultParamHandlervirtual
param_DefaultParamHandlerprotected
PrecursorIonSelectionPreprocessing()PrecursorIonSelectionPreprocessing
PrecursorIonSelectionPreprocessing(const PrecursorIonSelectionPreprocessing &source)PrecursorIonSelectionPreprocessing
prot_masses_PrecursorIonSelectionPreprocessingprotected
prot_peptide_seq_map_PrecursorIonSelectionPreprocessingprotected
pt_prot_map_PrecursorIonSelectionPreprocessingprotected
rt_prot_map_PrecursorIonSelectionPreprocessingprotected
savePreprocessedDB_(String db_path, String path)PrecursorIonSelectionPreprocessingprotected
savePreprocessedDBWithRT_(String db_path, String path)PrecursorIonSelectionPreprocessingprotected
sequences_PrecursorIonSelectionPreprocessingprotected
setFixedModifications(StringList &modifications)PrecursorIonSelectionPreprocessing
setGaussianParameters(DoubleReal mu, DoubleReal sigma)PrecursorIonSelectionPreprocessing
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
sigma_PrecursorIonSelectionPreprocessingprotected
subsections_DefaultParamHandlerprotected
updateMembers_()PrecursorIonSelectionPreprocessingprotectedvirtual
warn_empty_defaults_DefaultParamHandlerprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~PrecursorIonSelectionPreprocessing()PrecursorIonSelectionPreprocessing

OpenMS / TOPP release 1.11.1 Documentation generated on Thu Nov 14 2013 11:19:27 using doxygen 1.8.5