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MRMFeatureFinderScoring.h File Reference
#include <OpenMS/FORMAT/MzMLFile.h>
#include <OpenMS/FORMAT/FeatureXMLFile.h>
#include <OpenMS/FORMAT/TransformationXMLFile.h>
#include <OpenMS/FORMAT/TraMLFile.h>
#include <OpenMS/KERNEL/MRMTransitionGroup.h>
#include <OpenMS/KERNEL/MRMFeature.h>
#include <OpenMS/KERNEL/MSSpectrum.h>
#include <OpenMS/KERNEL/MSChromatogram.h>
#include <OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h>
#include <OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h>
#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/DataStructures.h>
#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h>
#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h>
#include <OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h>
#include <OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h>
#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h>
#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/Scoring.h>
#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/ALGO/MRMScoring.h>
#include <OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h>
#include <OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h>

Go to the source code of this file.

Classes

struct  OpenSwath_Scores
 A structure to hold the different scores computed by the FeatureFinder. More...
 
class  MRMFeatureFinderScoring
 The MRMFeatureFinder finds and scores peaks of transitions that coelute. More...
 

Namespaces

 OpenMS
 Main OpenMS namespace.
 

Macros

#define run_identifier   "unique_run_identifier"
 
#define USE_SP_INTERFACE
 

Functions

bool SortDoubleDoublePairFirst (const std::pair< double, double > &left, const std::pair< double, double > &right)
 

Macro Definition Documentation

#define run_identifier   "unique_run_identifier"
#define USE_SP_INTERFACE

Function Documentation

bool SortDoubleDoublePairFirst ( const std::pair< double, double > &  left,
const std::pair< double, double > &  right 
)

OpenMS / TOPP release 1.11.1 Documentation generated on Thu Nov 14 2013 11:19:23 using doxygen 1.8.5