apex_rt_ | EGHTraceFitter< PeakType > | protected |
check_defaults_ | DefaultParamHandler | protected |
checkMaximalRTSpan(const DoubleReal max_rt_span) | EGHTraceFitter< PeakType > | inlinevirtual |
checkMinimalRTSpan(const std::pair< DoubleReal, DoubleReal > &rt_bounds, const DoubleReal min_rt_span) | EGHTraceFitter< PeakType > | inlinevirtual |
computeTheoretical(const FeatureFinderAlgorithmPickedHelperStructs::MassTrace< PeakType > &trace, Size k) | EGHTraceFitter< PeakType > | inlinevirtual |
DefaultParamHandler(const String &name) | DefaultParamHandler | |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
defaults_ | DefaultParamHandler | protected |
defaultsToParam_() | DefaultParamHandler | protected |
EGHTraceFitter() | EGHTraceFitter< PeakType > | inline |
EGHTraceFitter(const EGHTraceFitter &other) | EGHTraceFitter< PeakType > | inline |
epsilon_abs_ | TraceFitter< PeakType > | protected |
epsilon_rel_ | TraceFitter< PeakType > | protected |
error_name_ | DefaultParamHandler | protected |
evaluate_(const gsl_vector *param, void *data, gsl_vector *f, gsl_matrix *J) | EGHTraceFitter< PeakType > | inlineprotectedstatic |
fit(FeatureFinderAlgorithmPickedHelperStructs::MassTraces< PeakType > &traces) | EGHTraceFitter< PeakType > | inlinevirtual |
fwhm_bound_ | EGHTraceFitter< PeakType > | protected |
getAlphaBoundaries_(const DoubleReal alpha) const | EGHTraceFitter< PeakType > | inlineprotected |
getCenter() const | EGHTraceFitter< PeakType > | inlinevirtual |
getDefaults() const | DefaultParamHandler | |
getFeatureIntensityContribution() | EGHTraceFitter< PeakType > | inlinevirtual |
getFWHM() const | EGHTraceFitter< PeakType > | inlinevirtual |
getGnuplotFormula(FeatureFinderAlgorithmPickedHelperStructs::MassTrace< PeakType > const &trace, const char function_name, const DoubleReal baseline, const DoubleReal rt_shift) | EGHTraceFitter< PeakType > | inlinevirtual |
getHeight() const | EGHTraceFitter< PeakType > | inlinevirtual |
getLowerRTBound() const | EGHTraceFitter< PeakType > | inlinevirtual |
getName() const | DefaultParamHandler | |
getOptimizedParameters_(gsl_multifit_fdfsolver *fdfsolver) | EGHTraceFitter< PeakType > | inlineprotectedvirtual |
getParameters() const | DefaultParamHandler | |
getSigmaSquare() const | EGHTraceFitter< PeakType > | inline |
getSubsections() const | DefaultParamHandler | |
getTau() const | EGHTraceFitter< PeakType > | inline |
getUpperRTBound() const | EGHTraceFitter< PeakType > | inlinevirtual |
height_ | EGHTraceFitter< PeakType > | protected |
jacobian_(const gsl_vector *param, void *data, gsl_matrix *J) | EGHTraceFitter< PeakType > | inlineprotectedstatic |
max_iterations_ | TraceFitter< PeakType > | protected |
NUM_PARAMS_ | EGHTraceFitter< PeakType > | protectedstatic |
operator=(const EGHTraceFitter &source) | EGHTraceFitter< PeakType > | inline |
OpenMS::TraceFitter::operator=(const TraceFitter &source) | TraceFitter< PeakType > | inlinevirtual |
OpenMS::DefaultParamHandler::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
optimize_(FeatureFinderAlgorithmPickedHelperStructs::MassTraces< PeakType > &traces, const Size num_params, double x_init[], Int(*residual)(const gsl_vector *x, void *params, gsl_vector *f), Int(*jacobian)(const gsl_vector *x, void *params, gsl_matrix *J), Int(*evaluate)(const gsl_vector *x, void *params, gsl_vector *f, gsl_matrix *J)) | TraceFitter< PeakType > | inlineprotected |
param_ | DefaultParamHandler | protected |
printState_(SignedSize iter, gsl_multifit_fdfsolver *s) | EGHTraceFitter< PeakType > | inlineprotectedvirtual |
region_rt_span_ | EGHTraceFitter< PeakType > | protected |
residual_(const gsl_vector *param, void *data, gsl_vector *f) | EGHTraceFitter< PeakType > | inlineprotectedstatic |
setInitialParameters_(FeatureFinderAlgorithmPickedHelperStructs::MassTraces< PeakType > &traces) | EGHTraceFitter< PeakType > | inlineprotected |
setName(const String &name) | DefaultParamHandler | |
setParameters(const Param ¶m) | DefaultParamHandler | |
sigma_5_bound_ | EGHTraceFitter< PeakType > | protected |
sigma_square_ | EGHTraceFitter< PeakType > | protected |
subsections_ | DefaultParamHandler | protected |
tau_ | EGHTraceFitter< PeakType > | protected |
TraceFitter() | TraceFitter< PeakType > | inline |
TraceFitter(const TraceFitter &source) | TraceFitter< PeakType > | inline |
updateMembers_() | EGHTraceFitter< PeakType > | inlineprotectedvirtual |
warn_empty_defaults_ | DefaultParamHandler | protected |
~DefaultParamHandler() | DefaultParamHandler | virtual |
~EGHTraceFitter() | EGHTraceFitter< PeakType > | inlinevirtual |
~TraceFitter() | TraceFitter< PeakType > | inlinevirtual |