class AtomIterator extends JmolAdapterAtomIterator
Modifier and Type | Field and Description |
---|---|
private Atom |
atom |
private int |
atomCount |
private Atom[] |
atoms |
private BS |
bsAtoms |
private int |
iatom |
Constructor and Description |
---|
AtomIterator(AtomSetCollection atomSetCollection) |
Modifier and Type | Method and Description |
---|---|
char |
getAlternateLocationID() |
java.lang.String |
getAtomName() |
int |
getAtomSerial() |
int |
getAtomSetIndex() |
int |
getAtomSite() |
BS |
getAtomSymmetry() |
float |
getBfactor() |
int |
getChainID() |
int |
getElementNumber() |
int |
getFormalCharge() |
java.lang.String |
getGroup3() |
char |
getInsertionCode() |
boolean |
getIsHetero() |
int |
getOccupancy() |
float |
getPartialCharge() |
float |
getRadius() |
int |
getSequenceNumber() |
JmolList<Tensor> |
getTensors() |
java.lang.Object |
getUniqueID() |
float |
getVectorX() |
float |
getVectorY() |
float |
getVectorZ() |
float |
getX() |
P3 |
getXYZ() |
float |
getY() |
float |
getZ() |
boolean |
hasNext() |
private int iatom
private Atom atom
private int atomCount
private Atom[] atoms
private BS bsAtoms
AtomIterator(AtomSetCollection atomSetCollection)
public boolean hasNext()
hasNext
in class JmolAdapterAtomIterator
public int getAtomSetIndex()
getAtomSetIndex
in class JmolAdapterAtomIterator
public BS getAtomSymmetry()
getAtomSymmetry
in class JmolAdapterAtomIterator
public int getAtomSite()
getAtomSite
in class JmolAdapterAtomIterator
public java.lang.Object getUniqueID()
getUniqueID
in class JmolAdapterAtomIterator
public int getElementNumber()
getElementNumber
in class JmolAdapterAtomIterator
public java.lang.String getAtomName()
getAtomName
in class JmolAdapterAtomIterator
public int getFormalCharge()
getFormalCharge
in class JmolAdapterAtomIterator
public float getPartialCharge()
getPartialCharge
in class JmolAdapterAtomIterator
public JmolList<Tensor> getTensors()
getTensors
in class JmolAdapterAtomIterator
public float getRadius()
getRadius
in class JmolAdapterAtomIterator
public float getX()
getX
in class JmolAdapterAtomIterator
public float getY()
getY
in class JmolAdapterAtomIterator
public float getZ()
getZ
in class JmolAdapterAtomIterator
public float getVectorX()
getVectorX
in class JmolAdapterAtomIterator
public float getVectorY()
getVectorY
in class JmolAdapterAtomIterator
public float getVectorZ()
getVectorZ
in class JmolAdapterAtomIterator
public float getBfactor()
getBfactor
in class JmolAdapterAtomIterator
public int getOccupancy()
getOccupancy
in class JmolAdapterAtomIterator
public boolean getIsHetero()
getIsHetero
in class JmolAdapterAtomIterator
public int getAtomSerial()
getAtomSerial
in class JmolAdapterAtomIterator
public int getChainID()
getChainID
in class JmolAdapterAtomIterator
public char getAlternateLocationID()
getAlternateLocationID
in class JmolAdapterAtomIterator
public java.lang.String getGroup3()
getGroup3
in class JmolAdapterAtomIterator
public int getSequenceNumber()
getSequenceNumber
in class JmolAdapterAtomIterator
public char getInsertionCode()
getInsertionCode
in class JmolAdapterAtomIterator
public P3 getXYZ()
getXYZ
in class JmolAdapterAtomIterator