Generic functions for Bioconductor


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Documentation for package ‘BiocGenerics’ version 0.2.0

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BiocGenerics-package Generic functions for Bioconductor
anyDuplicated Determine duplicate elements
BiocGenerics Generic functions for Bioconductor
boxplot Box plots
bzfile-class S4 connection classes
cbind Combine R objects by rows or columns
characterORconnection-class S4 connection classes
colnames Row and column names
combine Combining or merging different Bioconductor data structures
combine-method Combining or merging different Bioconductor data structures
connection-class S4 connection classes
density Kernel density estimation
duplicated Determine duplicate elements
eval Evaluate an (unevaluated) expression
Extremes Maxima and minima
file-class S4 connection classes
Filter Common higher-order functions in functional programming languages
Find Common higher-order functions in functional programming languages
funprog Common higher-order functions in functional programming languages
get Return the value of a named object
getObjectSlots Update an object to its current class definition
gzcon-class S4 connection classes
gzfile-class S4 connection classes
image Display a color image
intersect Set operations
lapply Apply a function over a list-like or vector-like R object
Map Common higher-order functions in functional programming languages
mapply Apply a function to multiple list-like or vector-like arguments
mget Return the value of a named object
NCOL The number of rows/columns of an array-like object
ncol The number of rows/columns of an array-like object
NROW The number of rows/columns of an array-like object
nrow The number of rows/columns of an array-like object
order Ordering permutation
paste Concatenate strings
pipe-class S4 connection classes
pmax Maxima and minima
pmax.int Maxima and minima
pmin Maxima and minima
pmin.int Maxima and minima
Position Common higher-order functions in functional programming languages
rbind Combine R objects by rows or columns
Reduce Common higher-order functions in functional programming languages
rep.int Replicate elements of a vector-like R object
residuals Extract model residuals
row+colnames Row and column names
rownames Row and column names
sapply Apply a function over a list-like or vector-like R object
setdiff Set operations
sets Set operations
sockconn-class S4 connection classes
strand Accessing strand information
strand<- Accessing strand information
table Cross tabulation and table creation
tapply Apply a function over a ragged array
terminal-class S4 connection classes
textConnection-class S4 connection classes
union Set operations
unique Extract unique elements
unz-class S4 connection classes
updateObject Update an object to its current class definition
updateObject-method Update an object to its current class definition
updateObjectFromSlots Update an object to its current class definition
url-class S4 connection classes
weights Extract model weights
xtabs Cross tabulation